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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.K00WP | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 220aa MW: 25069.7 Da PI: 5.7534 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9e-10 | 30 | 77 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +E++RR++++ +++L +llP+ + p++ l + + +A++YIk+L+ Aradu.K00WP 30 RLIEKNRRNHMKMLYSKLNSLLPNyN---PKEALPLPDQVDEAINYIKNLE 77 579*********************66...9999***************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 9.21E-7 | 22 | 81 | No hit | No description |
SuperFamily | SSF47459 | 3.93E-12 | 23 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.458 | 24 | 76 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.0E-10 | 28 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.0E-6 | 30 | 77 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0028 | 30 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MNSLVFQYIP IIMDPGSQPS SSTTNKIERR LIEKNRRNHM KMLYSKLNSL LPNYNPKEAL 60 PLPDQVDEAI NYIKNLEEKV KTAKEKKDGL LERMGRKRTR GGGRDGSGCS NTKPPQLEVH 120 ETGSCLEIVM TCGLENQFIF YEIIRILNEE NIDVKSANSS LLGDSMIHVL HAEIPPLLIE 180 FGATKVSERL KRFVNGSASD IELLQPEFWD FEIDTDIWSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 100 | GRKRTRG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015953866.1 | 1e-154 | PREDICTED: transcription factor bHLH36-like | ||||
TrEMBL | A0A0B2RQ84 | 5e-93 | A0A0B2RQ84_GLYSO; Transcription factor bHLH36 | ||||
TrEMBL | I1LS39 | 5e-93 | I1LS39_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA12G12880.1 | 1e-92 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF906 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 8e-35 | bHLH family protein |